PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00063.1.g01550.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 396aa    MW: 41572.7 Da    PI: 8.1997
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00063.1.g01550.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.52.5e-122442722755
                       G2-like  27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   A   ++lelm+vk+Ltl+hvkSHLQ+YR+
  Zjn_sc00063.1.g01550.1.am.mk 244 AATTSVLELMDVKDLTLAHVKSHLQMYRT 272
                                   55578***********************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.6E-12243273IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-7245272IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MSIDQLVPGW QQGWHPELGT VREQSGAKAF FGLKKILRSK AGSPDAVMPL DARVKSCACL  60
APPTNVRVQT AVQSGRKEKG KAAYPSVYQS AEASQLARRK QGEGQATLSA TASVRVTGSV  120
EIDRSSMEFL PASQPDLSLQ IGLPTGATPP HDQLHHHHHH AAPNATFFAP GAGGVVGSAG  180
TMSPSPHLPS MPMPLPLPLP VPMHPGAAGH PGGGGGGLAP LGRRACGGRP RSTRASCTPS  240
RSSAATTSVL ELMDVKDLTL AHVKSHLQMY RTVKNTERPA TSSDQADGFE NGSAGEICDD  300
NSVDLHGYGG GGRPETAPRH GRLAASATCN DHGSGTDAHA CCPMELLLKV DHQMQQSKSL  360
EILSDMNSCV SETTTSITSD LNLEFTLGRP HQNRRN
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9570082e-75EU957008.1 Zea mays clone 1580405 KANADI-like transcription factor FEATHERED mRNA, complete cds.
GenBankKJ7268192e-75KJ726819.1 Zea mays clone pUT3358 G2-like transcription factor (GLK55) mRNA, partial cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47213665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.17e-19G2-like family protein